As usual, I was looking at ways to secure the Windows server and came across these two tools which would probably be of interest to you.
1) GFI Languard Network Security Scanner
http://www.gfi.com/lannetscan/networkscann...er_freeware.htm
This will monitor your server and check for security holes and alert you about it.
2) GFI Languard System Integrity Monitor
http://www.gfi.com/lansim/
This will monitor file changes made and alert you about it.
Hope that helps.